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Immature stages and phylogenetic importance of Astrapaeus, a rove beetle genus of puzzling systematic position (Coleoptera, Staphylinidae, Staphylinini) Naturalis
Pietrykowska-Tudruj, E.; Staniec, B.; Wojas, T.; Alexey, A..
For the first time eggs, larvae and pupae obtained by rearing are described for Astrapaeus, a monotypic West Palearctic rove beetle genus of a puzzling phylogenetic position within the megadiverse tribe Staphylinini. Morphology of the immature stages of Astrapaeus ulmi is compared to that of other members of the tribe and discussed in a phylogenetic context. Contrary to conventional systematics and in accordance with recently developed phylogenetic hypotheses based on morphology of adults, larval morphology supports the non-Quediina affiliation of Astrapaeus. Eggs and pupae provided fewer characters with putative phylogenetic signal. Under laboratory conditions, a peculiar preference for isopod prey was observed for A. ulmi. However, this could not be...
Tipo: Article / Letter to the editor Palavras-chave: Egg; Feeding preference; Larva; Life cycle; Morphology; Phylogeny; Pupa; 42.75; 42.64.
Ano: 2014 URL: http://www.repository.naturalis.nl/record/472282
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In memoriam Prof. Dr J.T. Wiebes (1931-1999), evolutionary biologist and systematic entomologist Naturalis
Bruggen, A.C. van; Achterberg, C. van.
Born on 13 September 1931 in Rotterdam, Jacobus Theodorus [Koos] Wiebes read biology at Leiden University where he obtained his Ph.D. in 1963 on studies of Indo-Australian fig wasps. He started working on spiders (Lycosidae, Pisauridae) and beetles (Carabidae, Cetoniidae, Helodidae), but he earned his scientific reputation as a specialist in fig wasps (Hymenoptera: Agaonidae, Torymidae), their parasitoids and intricate host relationships (1961-1994: 89 papers). He served for many years on the staff of the Rijksmuseum van Natuurlijke Historie, Leiden (1955-1970, initially as assistant, later as curator of Coleoptera and as assistant director since 1965), to return as director of the newly merged national zoology and geology museums (ad interim 1982-1984,...
Tipo: Article / Letter to the editor Palavras-chave: Hymenoptera; Chalcidoidea; Agaonidae; Torymidae; Fig wasps; Figs; Co-evolution; Lepidoptera; Yponomeutidae; Yponomeuta; Ermine moths; Coleoptera; Carabidae; Cetoniidae; Helodidae; Arachnida; Lycosidae; Pisauridae; Evolutionary biology; Taxonomy; Phylogeny; Ecology; Biography; Bibliography; History of biology; Rijksmuseum van Natuurlijke Historie/Leiden-National Museum of Natural History/Leiden; 42.75.
Ano: 2000 URL: http://www.repository.naturalis.nl/record/216033
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Inclusion of Dasyochloa in the amphitropical genus Munroa (Poaceae, Chloridoideae) based on morphological evidence Darwiniana
Amarilla,Leonardo D; Chiapella,Jorge O; Nagahama,Nicolás; Anton,Ana M.
Munroa is a morphologically heterogeneous American genus of grasses, including five species with disjunct distribution in North and South America. Dasyochloa is a monotypic grass genus, common in western North America, with a controversial taxonomic position, because it has been alternatively included in Erioneuron, Koeleria, Triodia, and Uralepis. We evaluated the relationship of Dasyochloa with Munroa using a phylogenetic analysis of qualitative and quantitative morphological data. Dasyochloa was not supported as an independent genus from Munroa, as Dasyochloa and Munroa species formed a monophyletic group defined by seven synapomorphies. On this basis, we transfer Dasyochloa to Munroa, and propose the new combination M. pulchella together with the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: America; Amphitropical distribution; Chloridoideae; Dasyochloa; Munroa; Phylogeny; Taxonomy.
Ano: 2013 URL: http://www.scielo.org.ar/scielo.php?script=sci_arttext&pid=S0011-67932013000200006
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Indo-West Pacific Pycnogonida collected by some major oceanographic expeditions Naturalis
Stock, Jan H..
Seventy-six species of Pycnogonida, and some unidentifiable forms, belonging to 25 genera in all 8 families, of which 13 species are new to science, are recorded from the Indo-West Pacific region. New species are described in the genera Ascorhynchus, Ammothella, Achelia, Pantopipetta, Nymphon, Callipallene, Phoxichilidium, Anoplodactyhis, and Pycnogonum. A phylogenetic hierarchy of the families of extant Pycnogonida is presented.
Tipo: Article / Letter to the editor Palavras-chave: Pycnogonida; Indo-West Pacific; New species; Phylogeny.
Ano: 1994 URL: http://www.repository.naturalis.nl/record/504768
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Influenza A and B in a cohort of outpatient children and adolescent with influenza like-illness during two consecutive influenza seasons BJID
Machado,Clarisse M.; de Souza,Ana Carolina Mamana Fernandes; Romano,Camila Malta; dos Santos Freire,Wilton; Costa,Ângela Aparecida; Figueiredo,Walter Manso; Pannuti,Cláudio S.; Luna,Expedito J.A..
ABSTRACT Introduction Influenza is an important cause of morbimortality worldwide. Although people at the extremes of age have a greater risk of complications, influenza has been more frequently investigated in the elderly than in children, and inpatients than outpatients. Yearly vaccination with trivalent or quadrivalent vaccines is the main strategy to control influenza. Objectives Determine the clinical and molecular characteristics of influenza A and B infections in children and adolescents with influenza-like illness (ILI). Methods: A cohort of outpatient children and adolescents with ILI was followed for 20 months. Influenza was diagnosed with commercial multiplex PCR platforms. Results: 179 patients had 277 episodes of ILI, being 79 episodes of...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Influenza; Outpatient; Children; Vaccine; Lineages; Phylogeny; Cohort.
Ano: 2020 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702020000100073
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Ingolfiellidea (Crustacea, Malacostraca, Amphipoda): a phylogenetic and biogeographic analysis Naturalis
Vonk, Ronald; Schram, Frederick R..
The suborder Ingolfiellidea currently consists of 39 named species. An historical overview is presented and phylogenetic and biogeographic analyses are made. The result of the phylogenetic analysis suggests the definition of two new genera within an African freshwater group, namely Paraleleupia n. gen. and Proleleupia n. gen. Re-examination of a supposedly Italian relict species, Metaingolfiella mirabitis, with the aid of SEM techniques reveals a half-fusion of the head region with the first pereionite. The issue of the function of the ‘eyelobe’ is addressed and an explanation presented after examining with SEM such lobes in different species. Furthermore, additional descriptions are given based on the type-material of Metaingolfiella mirabilis,...
Tipo: Article / Letter to the editor Palavras-chave: Ingolfiellidea; Phylogeny; Biogeography; New genera; Paleogeographic maps; Bibliography.
Ano: 2003 URL: http://www.repository.naturalis.nl/record/534291
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Integrative study of a new cold-seep mussel (Mollusca: Bivalvia) associated with chemosynthetic symbionts in the Marmara Sea ArchiMer
Ritt, Benedicte; Duperron, Sebastien; Lorion, Julien; Lazar, Cassandre; Sarrazin, Jozee.
Recently, small Idas-like mussels have been discovered living on carbonate crusts associated with cold-seeps in the Marmara Sea. These mussels, here referred to as Idas-like nov. sp., differ morphologically and genetically from another species identified as Idas aff. modiolaeformis, living in the same type of ecosystem in the Nile Deep-Sea Fan (eastern Mediterranean Sea). A phylogenetic analysis confirms the distinction between the two species, which belong to highly divergent lineages. Carbon stable isotope values, as well as the detection of thiotroph-related bacteria in the gill tissue, support the presence of a symbiotic, thiotroph-derived nutrition. In contrast, Idas aff. modiolaeformis displays six different types of symbionts. Finally our...
Tipo: Text Palavras-chave: Mytilidae; Idas-like; Cold-seeps; Marmara Sea; Phylogeny; Symbiosis; Stable isotopes.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00098/20915/19672.pdf
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Introducing the Consolidated Species Concept to resolve species in the Teratosphaeriaceae Naturalis
Quaedvlieg, W.; Binder, M.; Groenewald, J.Z.; Summerell, B.A.; Carnegie, A.J.; Burgess, T.I.; Crous, P.W..
The Teratosphaeriaceae represents a recently established family that includes numerous saprobic, extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also provide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub, Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species...
Tipo: Article / Letter to the editor Palavras-chave: Eucalyptus; Multi-locus; Phylogeny; Species concepts; Taxonomy.
Ano: 2014 URL: http://www.repository.naturalis.nl/record/532346
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Jenynsia luxata, a new species from Northwestern Argentina, with additional observations of J. maculataRegan and phylogeny of the genus (Cyprinodontiformes: Anablepidae) Neotropical Ichthyology
Aguilera,Gastón; Mirande,Juan Marcos; Calviño,Pablo A.; Lobo,Luis Fernando.
Jenynsia luxata, a new species from northwestern Argentina, is described. This species is diagnosable from all other Jenynsia by the medial processes of left and right pelvic bones relatively reduced and separated from each other. The new species resembles J. multidentata, but it is further distinguished from this species by the absence of a swelling between the urogenital opening and the anterior base of the anal fin in females and details of coloration. Phylogenetic analyses, both under implied and equal weighting, recover the subgenera Plesiojenynsia and Jenynsia as monophyletic units. New information on previously missing characters of Jenynsia maculata is added. These data and phylogenetic characters coded for the new species herein described...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Pelvic bones; Phylogeny; Systematics; Taxonomy; Tucumán.
Ano: 2013 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252013000300565
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Karyotype description of Pomacea patula catemacensis (Caenogastropoda, Ampullariidae), with an assessment of the taxonomic status of Pomacea patula Biocell
Diupotex-Chong,María Esther; Cazzaniga,Néstor J.; Hernández-Santoyo,Alejandra; Betancourt-Rule,José Miguel.
Mitotic chromosomes of the freshwater snail Pomacea patula catemacensis (Baker 1922) were analyzed on gill tissue of specimens from the type locality (Lake Catemaco, Mexico). The diploid number of chromosomes is 2n = 26, including nine metacentric and four submetacentric pairs; therefore, the fundamental number is FN = 52. No sex chromosomes could be identified. The same chromosome number and morphology were already reported for P. flagellata, i.e., the other species of the genus living in Mexico. The basic haploid number for family Ampullariidae was reported to be n = 14 in the literature; so, its reduction to n = 13 is probably an apomorphy of the Mexican Pomacea snails. Lanistes bolteni, from Egypt, also shows n = 13, but its karyotype is much more...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Apple snails; Chromosomes; Taxonomy; Phylogeny; Mexico.
Ano: 2004 URL: http://www.scielo.org.ar/scielo.php?script=sci_arttext&pid=S0327-95452004000300004
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La familia pseudococcidae (Hemiptera: Coccoidea) en México Colegio de Postgraduados
Arriola Padilla, Víctor Javier..
Los pseudocóccidos presentan muchas especies de importancia económica, afectan a árboles frutales, forestales y de sombra, así como a cultivos agrícolas, plantas ornamentales y pastos. Se presenta una lista documentada y descriptiva de 153 especies de la familia Pseudococcidae en México, para cada una de ellas se mencionan nombres válidos, distribución, hospederos y diagnosis. Se registra un total de 75 familias de plantas hospederas asociadas a estos insectos. La información taxonómica y biológica está capturada en la base de datos COCCOIDEA. Con la información se elaboró una clave dicotómica de los 32 géneros de la familia en México. El análisis cladístico se elaboró con 37 caracteres, se construyó una matriz de datos y se analizó con el programa...
Tipo: Tesis Palavras-chave: Escamas; Piojos harinosos; Hospederos; Clave dicotómica; Filogenia; Doctorado; Entomología y Acarología; Scale; Mealybugs; Host plants; Dicotomic keys; Phylogeny.
Ano: 2009 URL: http://hdl.handle.net/10521/1531
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Large-scale analysis of NBS domain-encoding resistance gene analogs in Triticeae Genet. Mol. Biol.
Bouktila,Dhia; Khalfallah,Yosra; Habachi-Houimli,Yosra; Mezghani-Khemakhem,Maha; Makni,Mohamed; Makni,Hanem.
Proteins containing nucleotide binding sites (NBS) encoded by plant resistance genes play an important role in the response of plants to a wide array of pathogens. In this paper, an in silico search was conducted in order to identify and characterize members of NBS-encoding gene family in the tribe of Triticeae. A final dataset of 199 sequences was obtained by four search methods. Motif analysis confirmed the general structural organization of the NBS domain in cereals, characterized by the presence of the six commonly conserved motifs: P-loop, RNBS-A, Kinase-2, Kinase-3a, RNBS-C and GLPL. We revealed the existence of 11 distinct distribution patterns of these motifs along the NBS domain. Four additional conserved motifs were shown to be significantly...
Tipo: Info:eu-repo/semantics/article Palavras-chave: NBS domain; Data mining; Phylogeny; Plant resistance genes; Triticeae.
Ano: 2014 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572014000400017
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Leontocaris vanderlandi, a new species of hippolytid shrimp (Crustacea: Decapoda: Caridea) from the Seychelles, with an analysis of phylogenetic relations within the genus Naturalis
Fransen, C.H.J.M..
A new species of hippolytid shrimp, Leontocaris vanderlandi spec. nov. is described from deep water off the Seychelles. A comparison with the four other species in the genus is made, and a key to their identification is provided. A phylogenetic analysis of the species within the genus is presented.
Tipo: Article / Letter to the editor Palavras-chave: Crustacea; Decapoda; Caridea; Hippolytidae; Leontocaris vanderlandi spec. nov.; Seychelles; Phylogeny; 42.74.
Ano: 2001 URL: http://www.repository.naturalis.nl/record/219448
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Lobophora (Dictyotales) Species Richness, Ecology and Biogeography Across the North ‐ Eastern Atlantic Archipelagos and Description of Two New Species 1 ArchiMer
Vieira, Christophe; Henriques, Filipe; D'Hondt, Sofie; Neto, Ana; Almada, Carmen H.; Kaufmann, Manfred; Sansón, Marta; Sangil, Carlos; Clerck, Olivier De.
The brown alga Lobophora (Dictyotales, Phaeophyceae) is an important macroalga in the North‐eastern Atlantic archipelagos (i.e., Macaronesia). Notably in the Canaries it can dominate benthic assemblages. While the genus has been the subject of several ecological studies in the Canaries, no study has yet been conducted to assess species‐level diversity of Lobophora in Macaronesia. We reassessed the diversity of Lobophora in Macaronesia, reporting the presence of seven species (L. caboverdeana sp. nov., L. canariensis, L. dagamae sp. nov., L. delicata, L. dispersa, L. littlerorum, and L. schneideri). Lobophora spp. from Macaronesia are morphologically and ecologically distinguishable. In the Canaries, L. schneideri dominates the photophilic assemblages from...
Tipo: Text Palavras-chave: Barcoding; Cox3; Macaronesia; Phylogeny; Molecular taxonomy.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00654/76573/77704.pdf
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Locked in the icehouse: evolution of an endemic Epimeria (Amphipoda, Crustacea) species flock on the Antarctic shelf ArchiMer
Verheye, Marie L.; Backeljau, Thierry; D'Acoz, Cedric D'Udekem.
The Antarctic shelf’s marine biodiversity has been greatly influenced by the climatic and glacial history of the region. Extreme temperature changes led to the extinction of some lineages, while others adapted and flourished. The amphipod genus Epimeria is an example of the latter, being particularly diverse in the Antarctic region. By reconstructing a time-calibrated phylogeny based on mitochondrial (COI) and nuclear (28S and H3) markers and including Epimeria species from all oceans, this study provides a temporal and geographical framework for the evolution of Antarctic Epimeria. The monophyly of this genus is not supported by Bayesian Inference, as Antarctic and non-Antarctic Epimeria form two distinct well-supported clades, with Antarctic Epimeria...
Tipo: Text Palavras-chave: Amphipoda; Southern ocean; Historical biogeography; Phylogeny; Divergence times; Diversification.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00386/49712/83605.pdf
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Lophiobrycon weitzmani, a new genus and species of glandulocaudine fish (Characiformes: Characidae) from the rio Grande drainage, upper rio Paraná system, southeastern Brazil Neotropical Ichthyology
Castro,Ricardo M. C.; Ribeiro,Alexandre C.; Benine,Ricardo C.; Melo,Alex L. A..
A new genus and species of glandulocaudine, Lophiobrycon weitzmani, is described based on specimens collected in headwater tributary streams of the rio Grande, upper rio Paraná system, State of Minas Gerais, southeastern Brazil. The inclusion of the new species in the phylogeny of the subfamily Glandulocaudinae proposed by Weitzman & Menezes (1998), reveals a sister group relationship between the new genus and the monophyletic group composed of Glandulocauda and Mimagoniates that currently form the tribe Glandulocaudini. The new species can be readily distinguished from all other species of the tribe by the autapomorphic presence in adult male individuals (with more than 23.9 mm standard length) of an adipose-fin whose base extends for almost the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Glandulocaudinae; Phylogeny; Mimagoniates; Glandulocauda.
Ano: 2003 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252003000100002
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Madanidinium loirii gen. et sp nov. (Dinophyceae), a new marine benthic dinoflagellate from Martinique Island, Eastern Caribbean ArchiMer
Chomerat, Nicolas; Bilien, Gwenael.
A new benthic phototrophic dinoflagellate is described from sediments of a tropical marine cove at Martinique Island and its micromorphology is studied by means of light and electron microscopy. The cell contains small golden-brown chloroplasts and the oval nucleus is posterior. It is laterally compressed, almost circular in shape when viewed laterally. It consists of a small epitheca tilted toward the right lateral side and a larger hypotheca. In the left view, the cingulum is more anterior and the epitheca is reduced. The cingulum is displaced and left-handed. This organism is peculiar in having no apical pore and its thecal plate arrangement is 2 ' 1a 7 '' 5c 3s 5 ''' 1 ''''. The plates are smooth with small groups of pores scattered on their surface....
Tipo: Text Palavras-chave: Caribbean; Benthic; Dinophyceae; SEM; Phylogeny; Morphology; Taxonomy; Martinique; RDNA.
Ano: 2014 URL: http://archimer.ifremer.fr/doc/00195/30622/29458.pdf
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Malassezia vespertilionis sp. nov.: a new cold-tolerant species of yeast isolated from bats Naturalis
Lorch, J.M.; Palmer, J.M.; Vanderwolf, K.J.; Schmidt, K.Z.; Verant, M.L.; Weller, T.J.; Blehert, D.S..
Malassezia is a genus of medically-important, lipid-dependent yeasts that live on the skin of warmblooded animals. The 17 described species have been documented primarily on humans and domestic animals, but few studies have examined Malassezia species associated with more diverse host groups such as wildlife. While investigating the skin mycobiota of healthy bats, we isolated a Malassezia sp. that exhibited only up to 92 % identity with other known species in the genus for the portion of the DNA sequence of the internal transcribed spacer region that could be confidently aligned. The Malassezia sp. was cultured from the skin of nine species of bats in the subfamily Myotinae; isolates originated from bats sampled in both the eastern and western United...
Tipo: Article / Letter to the editor Palavras-chave: Chiroptera; Evolution; Hibernation; Malassezia; Myotis; New species; Phylogeny.
Ano: 2018 URL: http://www.repository.naturalis.nl/record/643310
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Marinilactibacillus piezotolerans sp nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor sediment of the Nankai Trough ArchiMer
Toffin, Laurent; Zink, Klaus; Kato, Chiaki; Pignet, Patricia; Bidault, Adeline; Bienvenu, Nadège; Birrien, Jean-louis; Prieur, Daniel.
A piezotolerant, mesophilic, marine lactic acid bacterium (strain LT20(T)) was isolated from a deep sub-seafloor sediment core collected at Nankai Trough, off the coast of Japan. Cells were Gram-positive, rod-shaped, non-sporulating and non-motile. The NaGl concentration range for growth was 0-120 gl(-1), with the optimum at 10-20 g l(-1). The temperature range for growth at PH 7.0 was 4-50 degreesC, with the optimum at 37-40 degreesC. The optimum pH for growth was 7.0-8.0. The optimum pressure for growth was 0.1 MPa with tolerance up to 30 MPa. The main cellular phospholipids were phosphatidylglycerols (25 %), diphosphatidylglycerols (34 %) and a group of compounds tentatively identified as ammonium-containing phosphatidylserines (32 %);...
Tipo: Text Palavras-chave: Phylogeny; Biochemistry; Microbiology; Thermophilic bacteria; Deep sub seafloor sediment.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/publication-592.pdf
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Meliponini neotropicais: o gênero Partamona Schwarz, 1939 (Hymenoptera, Apidae) Rev. Bras. entomol.
Pedro,Silvia R. M.; Camargo,João M. F..
Neotropical Meliponini: the genus Partamona Schwarz, 1939 (Hymenoptera, Apidae). The systematics and biogeography of Partamona Schwarz, a Neotropical genus of stingless bees (Meliponini, Apinae, Apidae), are revised. Seventeen new species are described: P. epiphytophila sp. nov., P. subtilis sp. nov., P. nhambiquara sp. nov., P. batesi sp. nov., P. yungarum sp. nov., P. vitae sp. nov., P. ferreirai sp. nov., P. gregaria sp. nov., P. auripennis sp. nov., P. nigrilabris sp. nov., P. combinata sp. nov., P. chapadicola sp. nov., P. seridoensis sp. nov., P. littoralis sp. nov., P. criptica sp. nov., P. rustica sp. nov. and P. sooretamae sp. nov. Partamona pseudomusarum Camargo, 1980, is considered as junior synonym of P. vicina Camargo, 1980. Types of P....
Tipo: Info:eu-repo/semantics/article Palavras-chave: Biogeography; Partamona; Phylogeny; Stingless bees; Systematics.
Ano: 2003 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0085-56262003000500001
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